TEF

Across TCGA cell cohorts, TEF RNA expression is significantly associated with the go_rna of many other GO terms, with 4,059 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible TEF-associated GO terms across cancer lineages are Golgi transport vesicle coating, COPI coating of Golgi vesicle, and Positive regulation of T-helper 17 cell lineage commitment. Each is linked with TEF in more than 11 cancer types. Because this analysis shows association rather than direction, both TEF-to-partner and partner-to-TEF results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Golgi transport vesicle coating grouped by TEF-low versus TEF-high in UPPER_AERODIGESTIVE_TRACT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (TEF→partner) and Y-score (partner→TEF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UPPER_AERODIGESTIVE_TRACT	Golgi transport vesicle coating →	+0.125	+1.165	<.001	<.001	3	12
UPPER_AERODIGESTIVE_TRACT	COPI coating of Golgi vesicle →	+0.125	+1.165	<.001	<.001	3	12
OESOPHAGUS	Positive regulation of T-helper 17 cell lineage commitment →	+0.187	+0.909	.004	.005	3	12
LUNG_SCLC	Nuclear migration along microtubule →	+0.158	+1.185	<.001	<.001	3	12
LARGE_INTESTINE	Regulatory ncRNA-mediated gene silencing →	+0.072	+0.825	<.001	<.001	3	12
UPPER_AERODIGESTIVE_TRACT	COPI-coated vesicle budding →	+0.125	+1.165	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,059 associations by consensus.

Golgi transport vesicle coating by TEF expression — UPPER_AERODIGESTIVE_TRACT

Explore this box plot interactively →