TDRP

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, TDRP mass-spec protein differs between tumor and matched normal tissue in 5 of 18 cancer types tested, making tumor–normal expression one of TDRP’s most consistent transcriptional readouts.

The strongest signal is observed in lung squamous cell carcinoma (LSCC), where TDRP mass-spec protein is repressed in tumor relative to normal tissue. In most cancer types TDRP is over-expressed in tumor, although a few such as LSCC and LUAD show the opposite, repressed pattern.

LSCC, HNSC, and LUAD are the cancer types where TDRP tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in TDRP mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LSCCFemaleAll−0.561<.0018view →
HNSCAllIII,IV+0.350.0017view →
LUADMaleII,III,IV−0.312<.0017view →
PDACAllIII,IV−0.560.0171view →
CCRCCMaleAll+0.135.0171view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 5 strongest of 5 lineages.

TDRP–LSCC

Tumor-vs-normal mass-spec protein box plot for TDRP in LSCC.

Open the LSCC breakdown →

Exploration