TBC1D30

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TBC1D30 mutation is significantly associated with the RNA expression of many other genes, with 851 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TBC1D30-associated genes across cancer lineages are OR9K2, FAM219B, and C14orf28. Each is linked with TBC1D30 in more than 1 cancer types. Because this analysis shows association rather than direction, both TBC1D30-to-partner and partner-to-TBC1D30 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR9K2 grouped by TBC1D30-low versus TBC1D30-high in SCLC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TBC1D30→partner) and Y-score (partner→TBC1D30) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SCLCOR9K2 →+0.147+4.437<.001.00131
UCECFAM219B →+0.457+3.332.006.00531
UCECC14orf28 →+0.363+2.332.005.00331
UCECFCER1A →-0.767-3.560.004.00231
UCECZADH2 →+0.586+2.321.002.00631
UCECSLC36A4 →+0.689+2.321.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 851 associations by consensus.

OR9K2 by TBC1D30 expression — SCLC

Box plot of OR9K2 in TBC1D30-low vs TBC1D30-high samples in SCLC.

Explore this box plot interactively →

Exploration