TBC1D28

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, TBC1D28 RNA expression is significantly associated with the go_rna of many other GO terms, with 375 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible TBC1D28-associated GO terms across cancer lineages are Articular cartilage development, Nucleoside triphosphate metabolic process, and Positive regulation of protein sumoylation. Each is linked with TBC1D28 in more than 3 cancer types. Because this analysis shows association rather than direction, both TBC1D28-to-partner and partner-to-TBC1D28 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (TBC1D28→partner) and Y-score (partner→TBC1D28) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UPPER_AERODIGESTIVE_TRACTArticular cartilage development →-0.131-0.031.008.00934
LUNG_NSCLC_LUSCNucleoside triphosphate metabolic process →+0.065+0.040.007.00434
LUNG_NSCLC_LUSCPositive regulation of protein sumoylation →+0.090+0.030<.001.00234
BLOOD_LeukemiaNegative regulation of DNA-templated transcription, elongation →+0.057+0.022<.001.00634
BREASTPositive regulation of myoblast differentiation →+0.085+0.067.003.00133
BREASTPositive regulation of DNA repair →+0.042+0.066<.001.00733
Each partner links to its Q-omics profile. Showing the 6 strongest of 375 associations by consensus.

Exploration