TBC1D19

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TBC1D19 mutation is significantly associated with the total protein of many other genes, with 25 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TBC1D19-associated genes across cancer lineages are INPP4B, MEK1, and Notch1. Each is linked with TBC1D19 in more than 1 cancer types. Because this analysis shows association rather than direction, both TBC1D19-to-partner and partner-to-TBC1D19 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, INPP4B grouped by TBC1D19-low versus TBC1D19-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TBC1D19→partner) and Y-score (partner→TBC1D19) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECINPP4B →-0.337-3.459.003.00532
UCECMEK1 →+0.327+2.115.013.01732
UCECNotch1 →+0.143+1.598.004.04032
UCECPaxillin →+0.255+2.469.006.01032
UCECCyclin-B1 →+0.600+2.584.002.01032
UCECEGFR_pY1068 →-0.223-2.584.013.01031
Each partner links to its Q-omics profile. Showing the 6 strongest of 25 associations by consensus.

INPP4B by TBC1D19 expression — UCEC

Box plot of INPP4B in TBC1D19-low vs TBC1D19-high samples in UCEC.

Explore this box plot interactively →

Exploration