TAF1D

Across TCGA patient cohorts, TAF1D mutation is significantly associated with the RNA expression of many other genes, with 1,114 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TAF1D-associated genes across cancer lineages are RN7SKP4, ARF4P3, and PACRG-AS2. Each is linked with TAF1D in more than 1 cancer types. Because this analysis shows association rather than direction, both TAF1D-to-partner and partner-to-TAF1D results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SKP4 grouped by TAF1D-low versus TAF1D-high in LIHC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TAF1D→partner) and Y-score (partner→TAF1D) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LIHC	RN7SKP4 →	+0.101	+4.647	<.001	.007	3	1
COAD	ARF4P3 →	+0.263	+5.435	<.001	.005	3	1
COAD	PACRG-AS2 →	+0.176	+6.721	<.001	<.001	3	1
COAD	RPL32P19 →	+0.200	+5.017	<.001	.009	3	1
COAD	LINC00709 →	+0.182	+7.142	<.001	<.001	3	1
COAD	BLOC1S2P1 →	+0.259	+5.080	<.001	.008	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,114 associations by consensus.

RN7SKP4 by TAF1D expression — LIHC

Explore this box plot interactively →