TAF1C

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TAF1C mutation is significantly associated with the RNA expression of many other genes, with 4,194 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible TAF1C-associated genes across cancer lineages are MAP2K1, UBE2L3, and CNEP1R1. Each is linked with TAF1C in more than 3 cancer types. Because this analysis shows association rather than direction, both TAF1C-to-partner and partner-to-TAF1C results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MAP2K1 grouped by TAF1C-low versus TAF1C-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TAF1C→partner) and Y-score (partner→TAF1C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMAP2K1 →+0.589+3.191<.001<.00133
UCECUBE2L3 →+0.332+2.021<.001<.00133
SKCMCNEP1R1 →+0.492+3.706.007<.00133
SKCMANXA2P1 →+0.302+3.182.006.00933
SKCMNUDC →+0.412+3.341.004.00533
UCECCDC45 →+0.680+2.375<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,194 associations by consensus.

MAP2K1 by TAF1C expression — UCEC

Box plot of MAP2K1 in TAF1C-low vs TAF1C-high samples in UCEC.

Explore this box plot interactively →

Exploration