SYNPO2L

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SYNPO2L mutation is significantly associated with the total protein of many other genes, with 39 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SYNPO2L-associated genes across cancer lineages are MEK1, Notch1, and PCNA. Each is linked with SYNPO2L in more than 1 cancer types. Because this analysis shows association rather than direction, both SYNPO2L-to-partner and partner-to-SYNPO2L results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MEK1 grouped by SYNPO2L-low versus SYNPO2L-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SYNPO2L→partner) and Y-score (partner→SYNPO2L) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMEK1 →+0.237+1.459.024.01132
UCECNotch1 →+0.095+1.428.019.02532
UCECPCNA →+0.167+1.169.007.01732
UCECRad50 →-0.178-1.765.010.01332
UCECAnnexin-1 →+0.409+2.107.006.00232
UCECS6_pS240_S244 →+0.306+1.925.008.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 39 associations by consensus.

MEK1 by SYNPO2L expression — UCEC

Box plot of MEK1 in SYNPO2L-low vs SYNPO2L-high samples in UCEC.

Explore this box plot interactively →

Exploration