SYNJ1

Across TCGA patient cohorts, SYNJ1 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,479 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SYNJ1-associated proteins across cancer lineages are INPP4A, RPL4, and RPL5. Each is linked with SYNJ1 in more than 3 cancer types. Because this analysis shows association rather than direction, both SYNJ1-to-partner and partner-to-SYNJ1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SYNJ1 versus INPP4A in OV, with a Pearson correlation of 0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SYNJ1→partner) and Y-score (partner→SYNJ1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	INPP4A →	+0.217	+0.785	.005	<.001	3	4
GBM	RPL4 →	-0.434	-0.468	<.001	<.001	3	4
GBM	RPL5 →	-0.242	-0.468	<.001	<.001	3	4
GBM	RPL7 →	-0.559	-0.445	<.001	<.001	3	4
LUAD	RSL1D1_S443 →	-1.038	-0.506	<.001	<.001	3	4
HNSC	SYNJ1_T1220 →	+0.386	+0.432	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,479 associations by consensus.

SYNJ1 vs INPP4A — OV

Explore this scatter interactively →