SYNJ1

Across TCGA cell cohorts, SYNJ1 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,909 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible SYNJ1-associated GO terms across cancer lineages are Phosphatidylinositol dephosphorylation, Phosphatidylinositol-3-phosphate biosynthetic process, and Golgi vesicle transport. Each is linked with SYNJ1 in more than 17 cancer types. Because this analysis shows association rather than direction, both SYNJ1-to-partner and partner-to-SYNJ1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Phosphatidylinositol dephosphorylation grouped by SYNJ1-low versus SYNJ1-high in OESOPHAGUS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SYNJ1→partner) and Y-score (partner→SYNJ1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OESOPHAGUS	Phosphatidylinositol dephosphorylation →	+0.088	+1.133	.003	.001	2	18
LUNG_NSCLC_LUAD	Phosphatidylinositol-3-phosphate biosynthetic process →	+0.079	+0.750	<.001	<.001	3	16
STOMACH	Golgi vesicle transport →	+0.088	+0.965	.002	.007	3	15
URINARY_TRACT	Phosphatidylinositol metabolic process →	+0.056	+1.087	.002	<.001	3	15
PANCREAS	Endoplasmic reticulum to Golgi vesicle-mediated transport →	+0.065	+0.507	<.001	<.001	3	15
URINARY_TRACT	Positive regulation of endosome organization →	-0.159	-0.815	<.001	<.001	3	14

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,909 associations by consensus.

Phosphatidylinositol dephosphorylation by SYNJ1 expression — OESOPHAGUS

Explore this box plot interactively →