SYN3-AS1

Across TCGA patient cohorts, SYN3-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,901 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SYN3-AS1-associated proteins across cancer lineages are RALGAPA1, BICD2, and PFN1. Each is linked with SYN3-AS1 in more than 3 cancer types. Because this analysis shows association rather than direction, both SYN3-AS1-to-partner and partner-to-SYN3-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SYN3-AS1 versus RALGAPA1 in BRCA, with a Pearson correlation of 0.47.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SYN3-AS1→partner) and Y-score (partner→SYN3-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	RALGAPA1 →	+0.399	+1.726	<.001	<.001	3	4
LSCC	BICD2 →	-0.449	-0.432	<.001	.002	3	4
GBM	PFN1 →	-0.309	-0.938	<.001	<.001	3	3
GBM	ASCC3 →	-0.196	-0.789	<.001	.001	3	3
GBM	ATP11C →	-0.363	-1.067	<.001	<.001	3	3
GBM	RCN1 →	-0.660	-1.120	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,901 associations by consensus.

SYN3-AS1 vs RALGAPA1 — BRCA

Explore this scatter interactively →