SYCP3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SYCP3 protein abundance is significantly associated with the RNA expression of many other genes, with 6,864 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SYCP3-associated genes across cancer lineages are ZNF330, RWDD4, and CFAP97. Each is linked with SYCP3 in more than 4 cancer types. Because this analysis shows association rather than direction, both SYCP3-to-partner and partner-to-SYCP3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SYCP3 versus ZNF330 in OV, with a Pearson correlation of 0.46.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SYCP3→partner) and Y-score (partner→SYCP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVZNF330 →+0.603+0.474<.001<.00135
OVRWDD4 →+0.716+0.496<.001<.00135
OVCFAP97 →+0.822+0.502<.001<.00135
OVC4orf33 →+0.738+0.401.001.00334
LUADTLR3 →+0.735+0.192<.001.00234
UCECFRG1 →+0.732+0.232<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,864 associations by consensus.

SYCP3 vs ZNF330 — OV

Per-sample scatter of SYCP3 vs ZNF330 in OV (Pearson r = 0.46).

Explore this scatter interactively →

Exploration