SUPT6H

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SUPT6H protein abundance is significantly associated with the RNA expression of many other genes, with 19,366 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SUPT6H-associated genes across cancer lineages are TMEM199, E2F1, and MBTD1. Each is linked with SUPT6H in more than 9 cancer types. Because this analysis shows association rather than direction, both SUPT6H-to-partner and partner-to-SUPT6H results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SUPT6H versus TMEM199 in LSCC, with a Pearson correlation of 0.71.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SUPT6H→partner) and Y-score (partner→SUPT6H) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCTMEM199 →+0.589+0.336<.001<.001310
LSCCE2F1 →+0.896+0.274<.001<.00138
LSCCMBTD1 →+0.657+0.322<.001<.00138
LSCCBRCA1 →+1.117+0.362<.001<.00138
HNSCDSN1 →+0.762+0.144.003.00438
UCECSRSF2 →+0.560+0.203<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,366 associations by consensus.

SUPT6H vs TMEM199 — LSCC

Per-sample scatter of SUPT6H vs TMEM199 in LSCC (Pearson r = 0.71).

Explore this scatter interactively →

Exploration