STX1B

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, STX1B mutation is significantly associated with the RNA expression of many other genes, with 5 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible STX1B-associated genes across cancer lineages are CFHR2, KRT71, and DYNAP. Each is linked with STX1B in more than 1 cancer types. Because this analysis shows association rather than direction, both STX1B-to-partner and partner-to-STX1B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CFHR2 grouped by STX1B-low versus STX1B-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (STX1B→partner) and Y-score (partner→STX1B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINECFHR2 →+0.076+6.022<.001.00132
BLOOD_LymphomaKRT71 →+0.013+5.643<.001.00231
BLOOD_LymphomaDYNAP →+0.071+4.867.002.00931
BLOOD_LymphomaKRTAP4-1 →+0.162+4.867<.001.00931
LARGE_INTESTINETMCO5A →+0.026+5.415<.001.00431
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

CFHR2 by STX1B expression — LARGE_INTESTINE

Box plot of CFHR2 in STX1B-low vs STX1B-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration