STN1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, STN1 protein abundance is significantly associated with the RNA expression of many other genes, with 2,393 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible STN1-associated genes across cancer lineages are TRIM8, SLK, and EPN3. Each is linked with STN1 in more than 2 cancer types. Because this analysis shows association rather than direction, both STN1-to-partner and partner-to-STN1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, STN1 versus TRIM8 in LUAD, with a Pearson correlation of 0.35.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (STN1→partner) and Y-score (partner→STN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADTRIM8 →+0.396+0.237.004<.00133
UCECSLK →+0.524+0.199<.001.00133
BRCAEPN3 →+0.808+0.191.006.00532
HNSCNPR3 →-1.012-0.224.001.00932
LUADTMEM150C →-1.084-0.175<.001<.00132
LUADSCIN →-1.290-0.188<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,393 associations by consensus.

STN1 vs TRIM8 — LUAD

Per-sample scatter of STN1 vs TRIM8 in LUAD (Pearson r = 0.35).

Explore this scatter interactively →

Exploration