STK11IP

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, STK11IP mutation is significantly associated with the RNA expression of many other genes, with 247 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible STK11IP-associated genes across cancer lineages are TRAT1, OR4C6, and IFNG. Each is linked with STK11IP in more than 2 cancer types. Because this analysis shows association rather than direction, both STK11IP-to-partner and partner-to-STK11IP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TRAT1 grouped by STK11IP-low versus STK11IP-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (STK11IP→partner) and Y-score (partner→STK11IP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaTRAT1 →+2.117+3.754.006.00233
BLOOD_LymphomaOR4C6 →+0.664+3.736<.001.00433
BLOOD_LeukemiaIFNG →+0.218+3.889<.001<.00132
BLOOD_LeukemiaFATE1 →+0.094+3.381<.001.00232
BLOOD_LymphomaOR56A5 →+0.071+3.342<.001.00832
BLOOD_LeukemiaOR2T2 →+0.192+3.536<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 247 associations by consensus.

TRAT1 by STK11IP expression — BLOOD_Leukemia

Box plot of TRAT1 in STK11IP-low vs STK11IP-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration