STIL

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, STIL protein abundance is significantly associated with the RNA expression of many other genes, with 17,442 significant associations in total. GBM shows the largest number of these associations.

The most reproducible STIL-associated genes across cancer lineages are TMEM231, FAM172A, and NCEH1. Each is linked with STIL in more than 1 cancer types. Because this analysis shows association rather than direction, both STIL-to-partner and partner-to-STIL results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, STIL versus TMEM231 in BRCA, with a Pearson correlation of 0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (STIL→partner) and Y-score (partner→STIL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCATMEM231 →+0.728+0.837.005.00432
HNSCFAM172A →-0.960-0.875.008.00132
BRCANCEH1 →-1.068-0.846.002.00332
HNSCMT2P1 →+1.581+0.875.001.00132
HNSCPBX1 →-1.719-0.876.004.00132
HNSCRNU6-171P →-2.027-0.876.003.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,442 associations by consensus.

STIL vs TMEM231 — BRCA

Per-sample scatter of STIL vs TMEM231 in BRCA (Pearson r = 0.33).

Explore this scatter interactively →

Exploration