STATH

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, STATH protein abundance is significantly associated with the RNA expression of many other genes, with 4,341 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible STATH-associated genes across cancer lineages are KLC3, IRF6, and DNAH7. Each is linked with STATH in more than 1 cancer types. Because this analysis shows association rather than direction, both STATH-to-partner and partner-to-STATH results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, STATH versus KLC3 in HNSC, with a Pearson correlation of -0.49.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (STATH→partner) and Y-score (partner→STATH) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCKLC3 →-0.749-1.183.007<.00131
HNSCIRF6 →-0.971-1.223.002.00631
HNSCDNAH7 →+0.962+1.392.008.00231
HNSCTAS2R9 →+0.633+1.583.001.00331
HNSCMETTL25 →+0.644+1.290<.001.00431
HNSCMTRES1 →+0.581+1.753<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,341 associations by consensus.

STATH vs KLC3 — HNSC

Per-sample scatter of STATH vs KLC3 in HNSC (Pearson r = -0.49).

Explore this scatter interactively →

Exploration