ST6GALNAC1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ST6GALNAC1 mutation is significantly associated with the RNA expression of many other genes, with 1,349 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ST6GALNAC1-associated genes across cancer lineages are UBE2Q2P9, MIR7702, and RPL21P31. Each is linked with ST6GALNAC1 in more than 2 cancer types. Because this analysis shows association rather than direction, both ST6GALNAC1-to-partner and partner-to-ST6GALNAC1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, UBE2Q2P9 grouped by ST6GALNAC1-low versus ST6GALNAC1-high in READ.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ST6GALNAC1→partner) and Y-score (partner→ST6GALNAC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
READUBE2Q2P9 →+0.362+5.039<.001.00833
UCECMIR7702 →+0.214+4.153<.001.00533
SKCMRPL21P31 →+0.079+2.355<.001.00533
CESCRNA5SP198 →+0.305+5.144<.001.00333
SKCMRN7SL134P →+0.078+2.855<.001.00133
READRNU6-212P →+0.839+5.219<.001.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,349 associations by consensus.

UBE2Q2P9 by ST6GALNAC1 expression — READ

Box plot of UBE2Q2P9 in ST6GALNAC1-low vs ST6GALNAC1-high samples in READ.

Explore this box plot interactively →

Exploration