ST3GAL5-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, ST3GAL5-AS1 RNA differs between tumor and matched normal tissue in 11 of 18 cancer types tested, making tumor–normal expression one of ST3GAL5-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where ST3GAL5-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types ST3GAL5-AS1 is over-expressed in tumor, although a few such as COAD and LUSC show the opposite, repressed pattern.

COAD, LUSC, and UCEC are the cancer types where ST3GAL5-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in ST3GAL5-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADFemaleII,III,IV−0.167<.0019view →
LUSCFemaleII,III,IV−1.112<.0016view →
UCECAllAll−0.870<.0016view →
BRCAAllIII,IV−0.419<.0016view →
READAllII,III,IV−0.302<.0014view →
KIRCAllAll−0.180.0034view →
LUADAllII,III,IV−0.484.0023view →
PRADAllAll−0.400<.0012view →
LIHCAllAll+0.111.0192view →
KICHAllAll−0.322.0291view →
HNSCAllIII,IV+0.184.0281view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 11 strongest of 11 lineages.

ST3GAL5-AS1–COAD

Tumor-vs-normal expression box plot for ST3GAL5-AS1 RNA in COAD.

Open the COAD breakdown →

Exploration