SSPOP

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SSPOP RNA expression is significantly associated with the protein abundance of many other proteins, with 7,314 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible SSPOP-associated proteins across cancer lineages are DDAH2, FAM117A_S213, and GALK1. Each is linked with SSPOP in more than 3 cancer types. Because this analysis shows association rather than direction, both SSPOP-to-partner and partner-to-SSPOP results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SSPOP→partner) and Y-score (partner→SSPOP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCDDAH2 →+0.314+0.426.001.00933
HNSCFAM117A_S213 →+0.574+0.338.006.00733
GBMGALK1 →+0.228+0.511<.001<.00133
HNSCGLCCI1_S303 →+0.504+0.340<.001.00433
BRCAHDGFL3 →+0.595+0.515.004.00133
GBMJPT1 →-0.650-0.534<.001.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,314 associations by consensus.

Exploration