SRGAP3-AS2

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, SRGAP3-AS2 RNA differs between tumor and matched normal tissue in 9 of 18 cancer types tested, making tumor–normal expression one of SRGAP3-AS2’s most consistent transcriptional readouts.

The strongest signal is observed in lung adenocarcinoma (LUAD), where SRGAP3-AS2 RNA is repressed in tumor relative to normal tissue. In most cancer types SRGAP3-AS2 is over-expressed in tumor, although a few such as LUAD and KIRC show the opposite, repressed pattern.

LUAD, KIRC, and LUSC are the cancer types where SRGAP3-AS2 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in SRGAP3-AS2 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LUADAllIII,IV−2.375<.0019view →
KIRCMaleII,III,IV−0.138<.0019view →
LUSCFemaleAll−3.276<.0018view →
COADAllAll+0.175<.0016view →
KICHAllAll−0.130<.0015view →
BRCAFemaleAll+0.365<.0014view →
PRADAllAll+0.205.0122view →
CHOLAllAll+0.222.0161view →
KIRPMaleAll−0.058.0321view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 9 strongest of 9 lineages.

SRGAP3-AS2–LUAD

Tumor-vs-normal expression box plot for SRGAP3-AS2 RNA in LUAD.

Open the LUAD breakdown →

Exploration