SPSB2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SPSB2 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,568 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible SPSB2-associated GO terms across cancer lineages are Radial spoke assembly, Canonical NF-kappaB signal transduction, and Chylomicron assembly. Each is linked with SPSB2 in more than 11 cancer types. Because this analysis shows association rather than direction, both SPSB2-to-partner and partner-to-SPSB2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Radial spoke assembly grouped by SPSB2-low versus SPSB2-high in URINARY_TRACT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SPSB2→partner) and Y-score (partner→SPSB2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
URINARY_TRACTRadial spoke assembly →+1.348+0.834<.001.008312
LARGE_INTESTINECanonical NF-kappaB signal transduction →+0.058+0.651.005.00138
BREASTChylomicron assembly →+0.153+0.510<.001.00428
SOFT_TISSUEFatty acid beta-oxidation using acyl-CoA dehydrogenase →+0.088+1.037<.001<.00136
BONEEndosome organization →+0.036+0.578.008.00936
LARGE_INTESTINERegulation of pattern recognition receptor signaling pathway →+0.041+0.714<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,568 associations by consensus.

Radial spoke assembly by SPSB2 expression — URINARY_TRACT

Box plot of Radial spoke assembly in SPSB2-low vs SPSB2-high samples in URINARY_TRACT.

Explore this box plot interactively →

Exploration