SPRR4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPRR4 mutation is significantly associated with the RNA expression of many other genes, with 331 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SPRR4-associated genes across cancer lineages are PRAMEF14, RPS3AP17, and RNU6-1315P. Each is linked with SPRR4 in more than 1 cancer types. Because this analysis shows association rather than direction, both SPRR4-to-partner and partner-to-SPRR4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPRR4→partner) and Y-score (partner→SPRR4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPRAMEF14 →+0.155+2.666<.001.00132
UCECRPS3AP17 →+0.079+2.999.005.00132
UCECRNU6-1315P →+0.326+2.426.007.00432
SKCMAKAP8L →+0.339+3.218.008.00931
SKCMSIN3B →+0.425+3.629.004.00131
SKCMEPS15L1 →+0.361+3.642.006.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 331 associations by consensus.

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