SPRR2G

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SPRR2G RNA expression is significantly associated with the go_rna of many other GO terms, with 349 significant associations in total. STOMACH shows the largest number of these associations.

The most reproducible SPRR2G-associated GO terms across cancer lineages are Cellular response to nutrient levels, Regulatory ncRNA-mediated post-transcriptional gene silencing, and Skin development. Each is linked with SPRR2G in more than 2 cancer types. Because this analysis shows association rather than direction, both SPRR2G-to-partner and partner-to-SPRR2G results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cellular response to nutrient levels grouped by SPRR2G-low versus SPRR2G-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SPRR2G→partner) and Y-score (partner→SPRR2G) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHCellular response to nutrient levels →+0.073+0.109<.001<.00133
STOMACHRegulatory ncRNA-mediated post-transcriptional gene silencing →+0.089+0.053.002.00333
STOMACHSkin development →+0.081+0.066.006.00933
STOMACHCarnitine biosynthetic process →-0.096-0.065.004.00933
STOMACHTermination of RNA polymerase II transcription →+0.104+0.053.001.00333
LUNG_NSCLC_LUADRegulation of protein catabolic process at postsynapse, modulating synaptic transmission →+0.135+0.030.003.00723
Each partner links to its Q-omics profile. Showing the 6 strongest of 349 associations by consensus.

Cellular response to nutrient levels by SPRR2G expression — STOMACH

Box plot of Cellular response to nutrient levels in SPRR2G-low vs SPRR2G-high samples in STOMACH.

Explore this box plot interactively →

Exploration