SPRN

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SPRN RNA expression is significantly associated with the go_rna of many other GO terms, with 4,063 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible SPRN-associated GO terms across cancer lineages are Viral translational termination-reinitiation, Regulation of transcription of nucleolar large rRNA by RNA polymerase I, and Pre-mRNA catabolic process. Each is linked with SPRN in more than 16 cancer types. Because this analysis shows association rather than direction, both SPRN-to-partner and partner-to-SPRN results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SPRN→partner) and Y-score (partner→SPRN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCViral translational termination-reinitiation →+0.093+1.027<.001<.001317
BONERegulation of transcription of nucleolar large rRNA by RNA polymerase I →+0.171+0.657<.001<.001316
BONEPre-mRNA catabolic process →+0.240+0.836<.001<.001316
SOFT_TISSUERegulation of DNA repair →+0.088+1.046<.001<.001316
SOFT_TISSUEPositive regulation of double-strand break repair →+0.098+1.258<.001<.001316
BONENegative regulation of DNA-templated transcription, elongation →+0.127+0.704.003.002315
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,063 associations by consensus.

Exploration