SPRING1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPRING1 mutation is significantly associated with the RNA expression of many other genes, with 1,044 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SPRING1-associated genes across cancer lineages are RNU5E-9P, RBMY2WP, and FGF12-AS1. Each is linked with SPRING1 in more than 1 cancer types. Because this analysis shows association rather than direction, both SPRING1-to-partner and partner-to-SPRING1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU5E-9P grouped by SPRING1-low versus SPRING1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPRING1→partner) and Y-score (partner→SPRING1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNU5E-9P →+0.250+4.010<.001.00732
BLCARBMY2WP →+0.049+7.640<.001.00931
HNSCFGF12-AS1 →+0.044+5.069.005.00831
HNSCMIR6893 →+0.402+5.435<.001.00531
UCECRANBP9 →+0.598+3.595.003.00131
UCECMIEF1 →+0.577+3.475.003.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,044 associations by consensus.

RNU5E-9P by SPRING1 expression — UCEC

Box plot of RNU5E-9P in SPRING1-low vs SPRING1-high samples in UCEC.

Explore this box plot interactively →

Exploration