SPPL2C

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SPPL2C mutation is significantly associated with the RNA expression of many other genes, with 221 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SPPL2C-associated genes across cancer lineages are OR1A1, NUBP1, and CACYBP. Each is linked with SPPL2C in more than 1 cancer types. Because this analysis shows association rather than direction, both SPPL2C-to-partner and partner-to-SPPL2C results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPPL2C→partner) and Y-score (partner→SPPL2C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaOR1A1 →+0.006+5.209<.001.00531
LARGE_INTESTINENUBP1 →+0.409+3.364.005.00231
LARGE_INTESTINECACYBP →+0.486+3.364.008.00231
LARGE_INTESTINEARL1 →+0.565+3.304.001.00531
LARGE_INTESTINENDUFAF4 →+0.650+3.364.001.00231
LARGE_INTESTINEPCNA →+0.663+3.169.002.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 221 associations by consensus.

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