SPINT1-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, SPINT1-AS1 RNA differs between tumor and matched normal tissue in 11 of 18 cancer types tested, making tumor–normal expression one of SPINT1-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal papillary cell carcinoma (KIRP), where SPINT1-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types SPINT1-AS1 is over-expressed in tumor, although a few such as KIRP and KIRC show the opposite, repressed pattern.

KIRP, KIRC, and BLCA are the cancer types where SPINT1-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in SPINT1-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRPMaleIII,IV−2.264<.00111view →
KIRCMaleIV−1.531<.00111view →
BLCAAllAll+1.517.0077view →
BRCAAllAll+0.614<.0016view →
CHOLMaleAll+3.806<.0015view →
UCECAllAll+1.990<.0014view →
STADAllAll+1.003.0123view →
COADFemaleIII,IV−0.916.0172view →
LIHCFemaleAll+0.844.0122view →
HNSCFemaleAll−0.601.0321view →
THCAFemaleAll+0.286.0291view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 11 strongest of 11 lineages.

SPINT1-AS1–KIRP

Tumor-vs-normal expression box plot for SPINT1-AS1 RNA in KIRP.

Open the KIRP breakdown →

Exploration