SPIN4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPIN4 protein abundance is significantly associated with the RNA expression of many other genes, with 752 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible SPIN4-associated genes across cancer lineages are ZNF821, ETFB, and C5orf15. Each is linked with SPIN4 in more than 1 cancer types. Because this analysis shows association rather than direction, both SPIN4-to-partner and partner-to-SPIN4 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPIN4→partner) and Y-score (partner→SPIN4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADZNF821 →+0.795+0.796.004.00831
LUADETFB →+0.601+0.747.003<.00131
LUADC5orf15 →+0.531+0.747.003<.00131
LUADCSNK1A1 →+0.685+0.747<.001<.00131
LUADDYNLRB1 →+0.753+0.747.005<.00131
LUADNDUFA2 →+0.666+0.747.006<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 752 associations by consensus.

Exploration