SPIN4-AS1

Across TCGA patient cohorts, SPIN4-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,124 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SPIN4-AS1-associated GO terms across cancer lineages are Vesicle-mediated transport to the plasma membrane, Cytosolic transport, and Autophagosome maturation. Each is linked with SPIN4-AS1 in more than 29 cancer types. Because this analysis shows association rather than direction, both SPIN4-AS1-to-partner and partner-to-SPIN4-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Vesicle-mediated transport to the plasma membrane grouped by SPIN4-AS1-low versus SPIN4-AS1-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SPIN4-AS1→partner) and Y-score (partner→SPIN4-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Vesicle-mediated transport to the plasma membrane →	+0.048	+0.193	<.001	<.001	3	30
STAD	Cytosolic transport →	+0.052	+0.201	<.001	<.001	3	30
ESCA	Autophagosome maturation →	+0.048	+0.221	<.001	<.001	3	29
STAD	Vesicle-mediated transport between endosomal compartments →	+0.058	+0.214	<.001	<.001	3	29
ESCA	Obsolete selective autophagy →	+0.055	+0.248	<.001	<.001	3	29
KIRC	Obsolete ncRNA export from nucleus →	+0.057	+0.290	<.001	<.001	3	29

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,124 associations by consensus.

Vesicle-mediated transport to the plasma membrane by SPIN4-AS1 expression — STAD

Explore this box plot interactively →