SPDYA

Across TCGA patient cohorts, SPDYA RNA expression is significantly associated with the RNA expression of many other genes, with 19,296 significant associations in total. UVM shows the largest number of these associations.

The most reproducible SPDYA-associated genes across cancer lineages are GOLGA6L9, CFAP44, and TRA2A. Each is linked with SPDYA in more than 32 cancer types. Because this analysis shows association rather than direction, both SPDYA-to-partner and partner-to-SPDYA results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SPDYA versus GOLGA6L9 in KIRP, with a Pearson correlation of 0.76.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPDYA→partner) and Y-score (partner→SPDYA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
KIRP	GOLGA6L9 →	+0.959	+0.481	<.001	<.001	3	33
UVM	CFAP44 →	+1.117	+0.437	<.001	<.001	3	33
UVM	TRA2A →	+1.681	+0.430	<.001	<.001	3	33
CHOL	KANSL1L-AS1 →	+1.003	+0.546	<.001	<.001	3	33
UVM	TARBP1 →	+1.472	+0.414	<.001	<.001	3	33
KIRP	TAS2R4 →	+0.851	+0.396	<.001	<.001	3	33

Each partner links to its Q-omics profile. Showing the 6 strongest of 19,296 associations by consensus.

SPDYA vs GOLGA6L9 — KIRP

Explore this scatter interactively →