SPATA31E1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPATA31E1 mutation is significantly associated with the RNA expression of many other genes, with 4,766 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SPATA31E1-associated genes across cancer lineages are CHEK2, METTL2A, and KXD1. Each is linked with SPATA31E1 in more than 3 cancer types. Because this analysis shows association rather than direction, both SPATA31E1-to-partner and partner-to-SPATA31E1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CHEK2 grouped by SPATA31E1-low versus SPATA31E1-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPATA31E1→partner) and Y-score (partner→SPATA31E1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMCHEK2 →+0.325+1.497.004.00634
UCECMETTL2A →+0.339+1.513<.001<.00134
UCECKXD1 →+0.236+1.828.004.00234
UCECVPS29 →+0.342+1.712<.001<.00134
UCECCKS2 →+0.594+2.643<.001<.00134
SKCMMETTL5 →+0.333+1.846<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,766 associations by consensus.

CHEK2 by SPATA31E1 expression — SKCM

Box plot of CHEK2 in SPATA31E1-low vs SPATA31E1-high samples in SKCM.

Explore this box plot interactively →

Exploration