SPATA31D5P

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPATA31D5P mutation is significantly associated with the RNA expression of many other genes, with 6,226 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible SPATA31D5P-associated genes across cancer lineages are SMC2, SCNN1B, and OXSM. Each is linked with SPATA31D5P in more than 4 cancer types. Because this analysis shows association rather than direction, both SPATA31D5P-to-partner and partner-to-SPATA31D5P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SMC2 grouped by SPATA31D5P-low versus SPATA31D5P-high in LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPATA31D5P→partner) and Y-score (partner→SPATA31D5P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADSMC2 →+0.683+2.333<.001.00335
LUSCSCNN1B →-1.082-2.321<.001.00534
COADOXSM →+0.349+3.183.008.00934
LUADSKA1 →+0.749+3.035.004<.00134
UCECEME1 →+0.573+2.055<.001<.00134
SKCMSUPV3L1 →+0.415+2.098<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,226 associations by consensus.

SMC2 by SPATA31D5P expression — LUAD

Box plot of SMC2 in SPATA31D5P-low vs SPATA31D5P-high samples in LUAD.

Explore this box plot interactively →

Exploration