SPANXN2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SPANXN2 RNA expression is significantly associated with the go_rna of many other GO terms, with 498 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible SPANXN2-associated GO terms across cancer lineages are Regulation of cell-matrix adhesion, Negative regulation of macrophage inflammatory protein 1 alpha production, and Regulation of actomyosin structure organization. Each is linked with SPANXN2 in more than 2 cancer types. Because this analysis shows association rather than direction, both SPANXN2-to-partner and partner-to-SPANXN2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of cell-matrix adhesion grouped by SPANXN2-low versus SPANXN2-high in SKIN.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SPANXN2→partner) and Y-score (partner→SPANXN2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINRegulation of cell-matrix adhesion →-0.054-0.149<.001<.00133
BLOOD_LeukemiaNegative regulation of macrophage inflammatory protein 1 alpha production →+0.863+0.006.006.00932
SKINRegulation of actomyosin structure organization →-0.031-0.113.005.00532
SKINP450-containing electron transport chain →+0.083+0.142<.001.00332
SKINDisaccharide transport →+0.849+0.138<.001<.00132
SKINSucrose transport →+0.849+0.138<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 498 associations by consensus.

Regulation of cell-matrix adhesion by SPANXN2 expression — SKIN

Box plot of Regulation of cell-matrix adhesion in SPANXN2-low vs SPANXN2-high samples in SKIN.

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