SPAG17

mutation — cross-omics
Cross-omicsMUTATION → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SPAG17 mutation is significantly associated with the mutation status of many other genes, with 6,455 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SPAG17-associated genes across cancer lineages are COL14A1, ZNF532, and RYR1. Each is linked with SPAG17 in more than 6 cancer types. Because this analysis shows association rather than direction, both SPAG17-to-partner and partner-to-SPAG17 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, COL14A1 grouped by SPAG17-low versus SPAG17-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPAG17→partner) and Y-score (partner→SPAG17) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINECOL14A1 →+2.459+2.345<.001<.00117
LUNG_NSCLC_LUADZNF532 →+3.478+3.303.006.00616
LARGE_INTESTINERYR1 →+1.971+4.572<.001<.00116
BLOOD_LeukemiaGRIK3 →+3.364+2.285.006.00616
LARGE_INTESTINEPCDHA2 →+2.321+2.129<.001<.00116
LARGE_INTESTINENIN →+2.847+2.693<.001<.00116
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,455 associations by consensus.

COL14A1 by SPAG17 expression — LARGE_INTESTINE

Box plot of COL14A1 in SPAG17-low vs SPAG17-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration