SPACA5B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SPACA5B mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible SPACA5B-associated genes across cancer lineages are SNORD115-22 and PABPC1L2B-AS1. Each is linked with SPACA5B in more than 1 cancer types. Because this analysis shows association rather than direction, both SPACA5B-to-partner and partner-to-SPACA5B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SNORD115-22 grouped by SPACA5B-low versus SPACA5B-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SPACA5B→partner) and Y-score (partner→SPACA5B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMSNORD115-22 →+0.383+7.816<.001.00831
SKCMPABPC1L2B-AS1 →+0.034+7.816<.001.00831
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

SNORD115-22 by SPACA5B expression — SKCM

Box plot of SNORD115-22 in SPACA5B-low vs SPACA5B-high samples in SKCM.

Explore this box plot interactively →

Exploration