SOX8

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SOX8 mutation is significantly associated with the RNA expression of many other genes, with 237 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SOX8-associated genes across cancer lineages are IFNA8, OR2W1, and GPHA2. Each is linked with SOX8 in more than 1 cancer types. Because this analysis shows association rather than direction, both SOX8-to-partner and partner-to-SOX8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, IFNA8 grouped by SOX8-low versus SOX8-high in SOFT_TISSUE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SOX8→partner) and Y-score (partner→SOX8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUEIFNA8 →+0.052+4.930<.001.00831
SOFT_TISSUEOR2W1 →+0.023+5.977<.001.00131
LUNG_NSCLC_LUADGPHA2 →+0.341+3.628<.001.00631
LUNG_NSCLC_LUADTPRX1 →+0.012+3.215<.001.00731
LUNG_NSCLC_LUADSSTR3 →+0.028+3.825<.001.00631
BLOOD_LymphomaMS4A10 →+0.006+4.867<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 237 associations by consensus.

IFNA8 by SOX8 expression — SOFT_TISSUE

Box plot of IFNA8 in SOX8-low vs SOX8-high samples in SOFT_TISSUE.

Explore this box plot interactively →

Exploration