SNX9

Across TCGA patient cohorts, SNX9 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,075 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible SNX9-associated proteins across cancer lineages are CALD1, CAVIN3, and CD248. Each is linked with SNX9 in more than 6 cancer types. Because this analysis shows association rather than direction, both SNX9-to-partner and partner-to-SNX9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNX9 versus CALD1 in LSCC, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX9→partner) and Y-score (partner→SNX9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	CALD1 →	+0.556	+0.431	<.001	<.001	3	7
OV	CAVIN3 →	+0.700	+0.709	.001	<.001	3	7
OV	CD248 →	+0.868	+0.720	<.001	<.001	3	7
OV	HSPG2 →	+0.439	+0.675	.001	<.001	3	7
LSCC	MAP1A →	+0.498	+0.387	<.001	<.001	3	7
COAD	PDLIM7 →	+0.561	+0.510	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,075 associations by consensus.

SNX9 vs CALD1 — LSCC

Explore this scatter interactively →