SNX9-AS1

Across TCGA patient cohorts, SNX9-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,657 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SNX9-AS1-associated GO terms across cancer lineages are TOR signaling, Establishment of protein localization to membrane, and Nuclear export. Each is linked with SNX9-AS1 in more than 18 cancer types. Because this analysis shows association rather than direction, both SNX9-AS1-to-partner and partner-to-SNX9-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TOR signaling grouped by SNX9-AS1-low versus SNX9-AS1-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX9-AS1→partner) and Y-score (partner→SNX9-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	TOR signaling →	+0.053	+0.294	.001	<.001	3	19
ESCA	Establishment of protein localization to membrane →	+0.066	+0.462	.001	<.001	3	18
ESCA	Nuclear export →	+0.059	+0.382	.002	<.001	3	18
STAD	Organelle disassembly →	+0.058	+0.323	<.001	<.001	3	18
STAD	Regulation of intracellular protein transport →	+0.053	+0.318	<.001	<.001	3	18
STAD	Response to endoplasmic reticulum stress →	+0.056	+0.349	<.001	<.001	3	18

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,657 associations by consensus.

TOR signaling by SNX9-AS1 expression — ESCA

Explore this box plot interactively →