SNX9-AS1

Across TCGA pan-cancer cohorts, SNX9-AS1 RNA differs between tumor and matched normal tissue in 4 of 18 cancer types tested, making tumor–normal expression one of SNX9-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney chromophobe (KICH), where SNX9-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types SNX9-AS1 is over-expressed in tumor, although a few such as KICH and BRCA show the opposite, repressed pattern.

KICH, BRCA, and PAAD are the cancer types where SNX9-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in SNX9-AS1 RNA (log₂); positive values indicate higher expression in tumor. p-values are from the differential-expression test.

Lineage	Gender	Stage	Fold-change	p	Sampling consensus
KICH	Female	All	−0.129	.004	3	view →
BRCA	All	IV	−0.280	.001	2	view →
PAAD	Male	All	−0.250	.006	2	view →
KIRP	Male	All	−0.038	.043	1	view →

Pink = over-expressed in tumor, green = repressed in tumor. Showing the 4 strongest of 4 lineages.

SNX9-AS1–KICH

Open the KICH breakdown →