SNX8

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SNX8 mutation is significantly associated with the RNA expression of many other genes, with 21 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SNX8-associated genes across cancer lineages are KERA, OR5B12, and MORN5. Each is linked with SNX8 in more than 1 cancer types. Because this analysis shows association rather than direction, both SNX8-to-partner and partner-to-SNX8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KERA grouped by SNX8-low versus SNX8-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX8→partner) and Y-score (partner→SNX8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaKERA →+0.007+3.381<.001.00231
BLOOD_LeukemiaOR5B12 →+0.034+2.926<.001.00931
BLOOD_LeukemiaMORN5 →+0.147+3.177<.001.00431
BLOOD_LeukemiaUBE2QL1 →+0.154+4.270.005<.00131
BLOOD_LeukemiaGSTT4 →+0.143+3.266<.001.00331
LARGE_INTESTINEIL17F →+0.042+2.444.002.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 21 associations by consensus.

KERA by SNX8 expression — BLOOD_Leukemia

Box plot of KERA in SNX8-low vs SNX8-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration