SNX29

Across TCGA patient cohorts, SNX29 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,502 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible SNX29-associated proteins across cancer lineages are SNX29_S268, SNX29_S330, and UCK2. Each is linked with SNX29 in more than 5 cancer types. Because this analysis shows association rather than direction, both SNX29-to-partner and partner-to-SNX29 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNX29 versus SNX29_S268 in LUAD, with a Pearson correlation of 0.35.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX29→partner) and Y-score (partner→SNX29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	SNX29_S268 →	+0.712	+0.417	.001	<.001	3	6
PDAC	SNX29_S330 →	+0.688	+0.410	<.001	<.001	3	6
BRCA	UCK2 →	-0.378	-0.608	<.001	<.001	3	5
HNSC	MRPS26 →	-0.268	-0.415	<.001	<.001	3	5
HNSC	ARHGAP17 →	+0.290	+0.483	<.001	<.001	3	5
BRCA	TMX2 →	-0.548	-0.431	<.001	.003	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,502 associations by consensus.

SNX29 vs SNX29_S268 — LUAD

Explore this scatter interactively →