Across TCGA cell cohorts, SNX2 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,086 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible SNX2-associated GO terms across cancer lineages are Positive regulation of centrosome duplication, Negative regulation of beige fat cell differentiation, and Regulation of centriole elongation. Each is linked with SNX2 in more than 11 cancer types. Because this analysis shows association rather than direction, both SNX2-to-partner and partner-to-SNX2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNX2→partner) and Y-score (partner→SNX2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OVARY	Positive regulation of centrosome duplication →	+0.120	+0.794	<.001	.001	2	12
LIVER	Negative regulation of beige fat cell differentiation →	+0.238	+0.879	<.001	.004	3	11
UPPER_AERODIGESTIVE_TRACT	Regulation of centriole elongation →	+0.104	+0.871	<.001	.002	3	11
LARGE_INTESTINE	Interkinetic nuclear migration →	+0.093	+0.877	<.001	<.001	3	11
URINARY_TRACT	Nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay →	+0.067	+0.716	<.001	.005	3	10
URINARY_TRACT	Monoubiquitinated protein deubiquitination →	+0.164	+1.391	.002	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,086 associations by consensus.

Exploration

SNX2 survival (RNA) · tumor vs normal (RNA) · all SNX2 data types