SNTB1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, SNTB1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,547 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible SNTB1-associated GO terms across cancer lineages are Negative regulation of lens fiber cell differentiation, Positive regulation of focal adhesion assembly, and ER-nucleus signaling pathway. Each is linked with SNTB1 in more than 8 cancer types. Because this analysis shows association rather than direction, both SNTB1-to-partner and partner-to-SNTB1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of lens fiber cell differentiation grouped by SNTB1-low versus SNTB1-high in LIVER.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNTB1→partner) and Y-score (partner→SNTB1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LIVERNegative regulation of lens fiber cell differentiation →+0.258+3.041<.001<.00129
BONEPositive regulation of focal adhesion assembly →+0.167+2.234.004.00537
PANCREASER-nucleus signaling pathway →+0.075+1.408.003.00737
BONERegulation of transmembrane receptor protein serine/threonine kinase signaling pathway →+0.048+1.870.007.00137
SKINCytosolic transport →+0.054+2.170<.001<.00136
OESOPHAGUSRegulation of cellular response to insulin stimulus →+0.075+2.060.001.00336
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,547 associations by consensus.

Negative regulation of lens fiber cell differentiation by SNTB1 expression — LIVER

Box plot of Negative regulation of lens fiber cell differentiation in SNTB1-low vs SNTB1-high samples in LIVER.

Explore this box plot interactively →

Exploration