SNRPN

Across TCGA cell cohorts, SNRPN RNA expression is significantly associated with the go_rna of many other GO terms, with 1,330 significant associations in total. OESOPHAGUS shows the largest number of these associations.

The most reproducible SNRPN-associated GO terms across cancer lineages are Microtubule-based transport, Positive regulation of tumor necrosis factor-mediated signaling pathway, and Positive regulation of cilium assembly. Each is linked with SNRPN in more than 5 cancer types. Because this analysis shows association rather than direction, both SNRPN-to-partner and partner-to-SNRPN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Microtubule-based transport grouped by SNRPN-low versus SNRPN-high in SOFT_TISSUE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNRPN→partner) and Y-score (partner→SNRPN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SOFT_TISSUE	Microtubule-based transport →	+0.024	+0.924	.003	.001	3	6
BLOOD_Leukemia	Positive regulation of tumor necrosis factor-mediated signaling pathway →	-0.078	-1.872	<.001	<.001	3	6
OESOPHAGUS	Positive regulation of cilium assembly →	+0.094	+3.675	.004	.004	3	5
SOFT_TISSUE	Transport along microtubule →	+0.027	+1.101	.007	.002	3	5
SOFT_TISSUE	Regulation of antigen processing and presentation of peptide antigen →	-0.772	-0.734	<.001	.002	3	5
UPPER_AERODIGESTIVE_TRACT	Mitochondrion to lysosome vesicle-mediated transport →	-0.155	-1.760	<.001	.006	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,330 associations by consensus.

Microtubule-based transport by SNRPN expression — SOFT_TISSUE

Explore this box plot interactively →