SNRPGP6

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, SNRPGP6 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,488 significant associations in total. STAD shows the largest number of these associations.

The most reproducible SNRPGP6-associated GO terms across cancer lineages are Long-chain fatty-acyl-CoA metabolic process, Regulation of postsynapse organization, and Pyrimidine nucleotide biosynthetic process. Each is linked with SNRPGP6 in more than 3 cancer types. Because this analysis shows association rather than direction, both SNRPGP6-to-partner and partner-to-SNRPGP6 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNRPGP6→partner) and Y-score (partner→SNRPGP6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADLong-chain fatty-acyl-CoA metabolic process →+0.064+0.054<.001.00534
STADRegulation of postsynapse organization →+0.053+0.070<.001<.00133
STADPyrimidine nucleotide biosynthetic process →+0.073+0.070<.001<.00133
STADMonocarboxylic acid biosynthetic process →+0.043+0.119<.001.00224
STADNegative regulation of DNA biosynthetic process →+0.075+0.066<.001<.00133
STADSmall nucleolar ribonucleoprotein complex assembly →+0.066+0.132<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,488 associations by consensus.

Exploration