SNRPE

Across TCGA patient cohorts, SNRPE protein abundance is significantly associated with the RNA expression of many other genes, with 11,748 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible SNRPE-associated genes across cancer lineages are CXCR2, CEACAM3, and IBA57. Each is linked with SNRPE in more than 4 cancer types. Because this analysis shows association rather than direction, both SNRPE-to-partner and partner-to-SNRPE results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SNRPE versus CXCR2 in LSCC, with a Pearson correlation of -0.45.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SNRPE→partner) and Y-score (partner→SNRPE) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	CXCR2 →	-1.207	-0.312	<.001	<.001	3	5
UCEC	CEACAM3 →	-0.612	-0.389	<.001	<.001	3	5
UCEC	IBA57 →	+0.396	+0.260	<.001	<.001	3	4
GBM	SLC16A1-AS1 →	+0.425	+0.290	.001	.003	3	4
LSCC	FFAR2 →	-0.993	-0.206	<.001	<.001	3	4
UCEC	FCGR3B →	-1.367	-0.455	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,748 associations by consensus.

SNRPE vs CXCR2 — LSCC

Explore this scatter interactively →