SNRNP40

Across TCGA cell cohorts, SNRNP40 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,541 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible SNRNP40-associated GO terms across cancer lineages are DNA replication checkpoint signaling, Positive regulation of cell cycle process, and Spindle elongation. Each is linked with SNRNP40 in more than 19 cancer types. Because this analysis shows association rather than direction, both SNRNP40-to-partner and partner-to-SNRNP40 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DNA replication checkpoint signaling grouped by SNRNP40-low versus SNRNP40-high in SOFT_TISSUE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNRNP40→partner) and Y-score (partner→SNRNP40) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SOFT_TISSUE	DNA replication checkpoint signaling →	+0.207	+1.021	<.001	<.001	3	20
PANCREAS	Positive regulation of cell cycle process →	+0.087	+0.833	.001	.003	3	20
OESOPHAGUS	Spindle elongation →	+0.300	+0.720	<.001	.002	3	20
BONE	DNA replication initiation →	+0.245	+1.055	<.001	<.001	3	20
BREAST	Metaphase chromosome alignment →	+0.092	+0.842	<.001	<.001	3	20
BREAST	Positive regulation of G2/M transition of mitotic cell cycle →	+0.129	+0.999	<.001	<.001	3	19

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,541 associations by consensus.

DNA replication checkpoint signaling by SNRNP40 expression — SOFT_TISSUE

Explore this box plot interactively →