SNRK

Across TCGA cell cohorts, SNRK RNA expression is significantly associated with the go_rna of many other GO terms, with 4,103 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible SNRK-associated GO terms across cancer lineages are Cytosolic transport, Positive regulation of organelle assembly, and Phosphatidylinositol metabolic process. Each is linked with SNRK in more than 13 cancer types. Because this analysis shows association rather than direction, both SNRK-to-partner and partner-to-SNRK results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cytosolic transport grouped by SNRK-low versus SNRK-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (SNRK→partner) and Y-score (partner→SNRK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BONE	Cytosolic transport →	+0.082	+0.693	.002	<.001	3	14
UPPER_AERODIGESTIVE_TRACT	Positive regulation of organelle assembly →	+0.068	+0.710	<.001	<.001	3	14
BONE	Phosphatidylinositol metabolic process →	+0.057	+0.599	.001	.004	3	14
LARGE_INTESTINE	Microtubule polymerization →	+0.099	+0.574	.001	<.001	3	13
KIDNEY	Positive regulation of mRNA metabolic process →	+0.065	+1.059	<.001	<.001	3	13
LUNG_SCLC	Regulation of mRNA export from nucleus →	+0.132	+0.674	.001	.004	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,103 associations by consensus.

Cytosolic transport by SNRK expression — BONE

Explore this box plot interactively →